NDB ID: BD0070


Title:CRYSTAL STRUCTURE OF A FREE KB DNA
Molecular Description:5'-D(CpGpCpTpGpGpApApApTpTpTpCpCpApGp
C)-3'
Structural Features:B DOUBLE HELIX, FLIPPED-OUT BASES
Nucleic Acid Sequence:
ChainA:(DC) (DG) (DC) (DT) (DG) (DG) (DA) (DA) (DA) (DT) (DT) (DT) (DC) (DC) (DA) (DG) (DC)
Primary Citation:Huang, D.B., Phelps, C.B., Fusco, A.J., Ghosh, G.
Crystal structure of a free kappaB DNA: insights into DNA recognition by transcription factor NF-kappaB.
J.Mol.Biol. , 346, pp. 147 - 160, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 2
Cell Constants:
a = 38.916b = 38.916c = 158.910(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the CNS 1.1 program. The R value is 20.7 for 6341 reflections in the resolution range 14.37 to 1.60 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1SGS

PubMed: 15663934




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