NDB ID: BD0086


Title:AGC DUPLEX B-DNA
Molecular Description:5'-D(CpCpGpCpTpApGpCpGpG)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DC) (DC) (DG) (DC) (DT) (DA) (DG) (DC) (DG) (DG)
Primary Citation:Hays, F.A., Teegarden, A., Jones, Z.J., Harms, M., Raup, D., Watson, J., Cavaliere, E., Ho, P.S.
How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa , 102, pp. 7157 - 7162, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 63.891b = 24.303c = 40.388(Ångstroms)
= 90.00 = 122.55 = 90.00(degrees)
Refinement:The structure was refined using the REFMAC 5.2.0005 program. The R value is 26.6 for 2235 reflections in the resolution range 17.11 to 2.20 Ångstroms with Fobs > 0.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1ZFM

PubMed: 15870206




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