NDB ID: BD0093


Title:X-RAY STRUCTURE OF THE OLIGONUCLEOTIDE SEQUENCE D(AAATTT)
Molecular Description:5'-D(ApApApTpTpT)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,C,B:(DA) (DA) (DA) (DT) (DT) (DT)
Primary Citation:Valls, N., Santaolalla, A., Campos, J.L., Subirana, J.A.
Packing features of the all-AT oligonucleotide d(AAATTT).
J.Biomol.Struct.Dyn. , 24, pp. 547 - 552, 2007.
Experimental Information:X-RAY DIFFRACTION
Space Group: 2
Cell Constants:
a = 43.127b = 43.127c = 176.579(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the REFMAC 5.1.24 program. The R value is 28.2 for 1139 reflections in the resolution range 25.00 to 3.11 Ångstroms .

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 2G1Z

PubMed: 17508776




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