NDB ID: BDJ019
Title:
STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-G-T-T-G-G AND COMPARISON WITH ISOMORPHOUS DECAMERS C-C-A-A-G-A-T-T-G-G AND C-C-A-G-G-C-C-T-G-G
Molecular Description:
5'-D(CpCpApApCpGpTpTpGpG)-3'
Structural Features:
B DOUBLE HELIX
Nucleic Acid Sequence:
Chain
A:
(DC) (DC) (DA) (DA) (DC) (DG) (DT) (DT) (DG) (DG)
Primary Citation:
Prive, G.G., Yanagi, K., Dickerson, R.E.
Structure of the B-DNA decamer C-C-A-A-C-G-T-T-G-G and comparison with isomorphous decamers C-C-A-A-G-A-T-T-G-G and C-C-A-G-G-C-C-T-G-G.
J.Mol.Biol.
,
217
, pp. 177 - 199, 1991.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
C
1
2
1
Cell Constants:
a = 32.250
b = 25.530
c = 34.380
(Ångstroms)
= 90.00
= 113.40
= 90.00
(degrees)
Refinement:
The structure was refined using the NUCLSQ program. The R value is 16.0 for 4402 reflections in the resolution range 8.000 to 1.400 Ångstroms with Fobs > 1.000 sigma(Fobs).
Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
5DNB
PubMed:
1988677
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©1995-2012 The Nucleic Acid Database Project
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