NDB ID: BDJ037
Title:
ALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-G
Molecular Description:
5'-D(CpGpApTpApTpApTpCpG)-3'
MAGNESIUM
Structural Features:
B DOUBLE HELIX
Nucleic Acid Sequence:
Chain
s
A,B:
(DC) (DG) (DA) (DT) (DA) (DT) (DA) (DT) (DC) (DG)
Primary Citation:
Yuan, H., Quintana, J., Dickerson, R.E.
Alternative structures for alternating poly(dA-dT) tracts: the structure of the B-DNA decamer C-G-A-T-A-T-A-T-C-G.
Biochemistry
,
31
, pp. 8009 - 8021, 1992.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P
2
1
2
1
2
1
Cell Constants:
a = 38.690
b = 39.560
c = 33.640
(Ångstroms)
= 90.00
= 90.00
= 90.00
(degrees)
Refinement:
The structure was refined using the NUCLSQ program. The R value is 16.5 for 1852 reflections in the resolution range 8.000 to 2.000 Ångstroms with Fobs > 2.000 sigma(Fobs).
Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
1D57
PubMed:
1510987
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