NDB ID: BDJ081


Title:STRUCTURE OF A DNA ANALOG OF THE PRIMER FOR HIV-1 RT SECOND STRAND SYNTHESIS
Molecular Description:5'-D(CpApApApGpApApApApG)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,C,E:(DC) (DA) (DA) (DA) (DG) (DA) (DA) (DA) (DA) (DG)
ChainsB,D,F:(DC) (DT) (DT) (DT) (DT) (DC) (DT) (DT) (DT) (DG)
Primary Citation:Han, G.W., Kopka, M.L., Cascio, D., Grzeskowiak, K., Dickerson, R.E.
Structure of a DNA analog of the primer for HIV-1 RT second strand synthesis.
J.Mol.Biol. , 269, pp. 811 - 826, 1997.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 59.820b = 28.280c = 72.490(Ångstroms)
= 90.00 = 103.87 = 90.00(degrees)
Refinement:The structure was refined using the TNT program. The R value is 23.3 for 9630 reflections in the resolution range 8.000 to 1.850 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2
Enlarge Biological Assembly 3



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)123

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 307D

PubMed: 9223643




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