NDB ID: BDJB48


Title:THE CRYSTAL STRUCTURE OF THE TRIGONAL DECAMER C-G-A-T-C-G-6MEA-T-C-G: A B-DNA HELIX WITH 10.6 BASE-PAIRS PER TURN
Molecular Description:5'-D(CpGpApTpCpGp(6MA)pTpCpG)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DC) (DG) (DA) (DT) (DC) (DG) (6MA) (DT) (DC) (DG)
Primary Citation:Baikalov, I., Grzeskowiak, K., Yanagi, K., Quintana, J., Dickerson, R.E.
The crystal structure of the trigonal decamer C-G-A-T-C-G-6meA-T-C-G: a B-DNA helix with 10.6 base-pairs per turn.
J.Mol.Biol. , 231, pp. 768 - 784, 1993.
Experimental Information:X-RAY DIFFRACTION
Space Group: 32   1
Cell Constants:
a = 33.378b = 33.378c = 98.302(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the NUCLSQ program. The R value is 17.2 for 2282 reflections in the resolution range 8.000 to 2.000 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1DA3

PubMed: 8515450




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