NDB ID: BDJB50


Title:DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLOR
Molecular Description:5'-D(CpCpApGpGpCp(5CM)pTpGpG)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DC) (DC) (DA) (DG) (DG) (DC) (5CM) (DT) (DG) (DG)
Primary Citation:Hahn, M., Heinemann, U.
DNA helix structure and refinement algorithm: comparison of models for d(CCAGGCm5CTGG) derived from NUCLSQ, TNT and X-PLOR.
Acta Crystallogr.,Sect.D , 49, pp. 468 - 477, 1993.
Experimental Information:X-RAY DIFFRACTION
Space Group: 6
Cell Constants:
a = 53.770b = 53.770c = 34.350(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 19.1 for 3799 reflections in the resolution range 8.000 to 1.700 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 123D

PubMed: 15299506




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