NDB ID: BDL011


Title:STRUCTURAL FEATURES AND HYDRATION OF A DODECAMER DUPLEX CONTAINING TWO C.A MISPAIRS
Molecular Description:5'-D(CpGpCpApApApTpTpCpGpCpG)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DC) (DG) (DC) (DA) (DA) (DA) (DT) (DT) (DC) (DG) (DC) (DG)
Primary Citation:Hunter, W.N., Brown, T., Kennard, O.
Structural features and hydration of a dodecamer duplex containing two C.A mispairs.
Nucleic Acids Res. , 15, pp. 6589 - 6605, 1987.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 25.370b = 41.440c = 65.200(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the NUCLSQ program. The R value is 19.0 for 2029 reflections in the resolution range 8.000 to 2.500 Ångstroms with I > 2.000 sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1D99

PubMed: 3627999




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