NDB ID: BDL070


Title:STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES
Molecular Description:5'-D(CpGpCpTpCpTpApGpApGpCpG)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B,C,D:(DC) (DG) (DC) (DT) (DC) (DT) (DA) (DG) (DA) (DG) (DC) (DG)
Primary Citation:Urpi, L., Tereshko, V., Malinina, L., Huynh-Dinh, T., Subirana, J.A.
Structural comparison between the d(CTAG) sequence in oligonucleotides and trp and met repressor-operator complexes.
Nat.Struct.Biol. , 3, pp. 325 - 328, 1996.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 35.050b = 68.910c = 26.150(Ångstroms)
= 90.00 = 91.16 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 19.7 for 4222 reflections in the resolution range 8.000 to 2.250 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 249D

PubMed: 8599757




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey