NDB ID: BDLB83


Title:EFFECT OF CYTOSINE METHYLATION ON DNA-DNA RECOGNITION AT CPG STEPS
Molecular Description:5'-D(ApCpCpGpCp(5CM)pGpGpCpGpCpC)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainA:(DA) (DC) (DC) (DG) (DC) (5CM) (DG) (DG) (DC) (DG) (DC) (DC)
ChainB:(DG) (DG) (DC) (DG) (DC) (5CM) (DG) (DG) (DC) (DG) (DG) (DT)
Primary Citation:Mayer-Jung, C., Moras, D., Timsit, Y.
Effect of cytosine methylation on DNA-DNA recognition at CpG steps.
J.Mol.Biol. , 270, pp. 328 - 335, 1997.
Experimental Information:X-RAY DIFFRACTION
Space Group: 3
Cell Constants:
a = 65.530b = 65.530c = 46.350(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 19.1 for 1626 reflections in the resolution range 8.000 to 2.700 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 329D

PubMed: 9237900




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