NDB ID: DD0015


Title:STRUCTURE OF THE TOPOISOMERASE II POISON BOUND TO DNA
Molecular Description:5'-D(CpGpTpApCpG)-3'

9-AMINO-[N-(2-DIMETHYLAMINO)ETHYL]ACRIDINE-4- CARBOXAMIDE
Structural Features:RH DOUBLE HELIX
Nucleic Acid Sequence:
ChainA:(DC) (DG) (DT) (DA) (DC) (DG)
Primary Citation:Adams, A., Guss, J.M., Collyer, C.A., Denny, W.A., Wakelin, L.P.
Crystal structure of the topoisomerase II poison 9-amino-[N-(2-dimethylamino)ethyl]acridine-4-carboxamide bound to the DNA hexanucleotide d(CGTACG)2.
Biochemistry , 38, pp. 9221 - 9233, 1999.
Experimental Information:X-RAY DIFFRACTION
Space Group: 64
Cell Constants:
a = 30.161b = 30.161c = 39.692(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 19.3 for 2705 reflections in the resolution range 16.0 to 1.6 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 465D

PubMed: 10413496




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