NDB ID: DD0016


Title:NI2+/GUANINE INTERACTIONS AND NETROPSIN/GUANINE STACKING IN D(CGTATATACG)2
Molecular Description:5'-D(CpGpTpApTpApTpApCpG)-3'
NETROPSIN
Structural Features:RH DOUBLE HELIX, FLIPPED-OUT BASES
Nucleic Acid Sequence:
ChainsA,B:(DC) (DG) (DT) (DA) (DT) (DA) (DT) (DA) (DC) (DG)
Primary Citation:Abrescia, N.G., Malinina, L., Subirana, J.A.
Stacking interaction of guanine with netropsin in the minor groove of d(CGTATATACG)2.
J.Mol.Biol. , 294, pp. 657 - 666, 1999.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 25.180b = 39.110c = 53.470(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 20.8 for 5942 reflections in the resolution range 20.0 to 1.58 Ångstroms with I > 0. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 473D

PubMed: 10610787




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