NDB ID: DD0018


Title:D232-CGTACG
Molecular Description:5'-D(CpGpTpApCpG)-3'
BIS-INTERCALATOR D232
Structural Features:RH DOUBLE HELIX
Nucleic Acid Sequence:
ChainA:(DC) (DG) (DT) (DA) (DC) (DG)
Primary Citation:Shui, X., Peek, M.E., Lipscomb, L.A., Wilkinson, A.P., Williams, L.D., Gao, M., Ogata, C., Roques, B.P., Garbay-Jaureguiberry, C., Wilkinson, A.P., Williams, L.D.
Effects of cationic charge on three-dimensional structures of intercalative complexes: structure of a bis-intercalated DNA complex solved by MAD phasing.
Curr.Med.Chem. , 7, pp. 59 - 71, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 65   2
Cell Constants:
a = 28.240b = 28.240c = 72.744(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the X-PLOR 3.851 program. The R value is 19.6 for 4682 reflections in the resolution range 10. to 2.4 Ångstroms with I > 2. sigma(I).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
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Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1C9Z

PubMed: 10637357




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