NDB ID: DD0026


Title:CRYSTAL STRUCTURE ANALYSIS OF D(CG(5-BRU)ACG) COMPLEXES TO A PHENAZINE
Molecular Description:5'-D(CpGp(BRO)UpApCpG)-3'
PHENAZINE DERIVATIVE
Structural Features:RH DOUBLE HELIX, FLIPPED-OUT BASES
Nucleic Acid Sequence:
ChainsA,B:(DC) (DG) (DU) (DA) (DC) (DG)
Primary Citation:Thorpe, J.H., Hobbs, J.R., Todd, A.K., Denny, W.A., Charlton, P., Cardin, C.J.
Guanine specific binding at a DNA junction formed by d[CG(5-BrU)ACG](2) with a topoisomerase poison in the presence of Co(2+) ions.
Biochemistry , 39, pp. 15055 - 15061, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 2
Cell Constants:
a = 29.420b = 53.440c = 41.320(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 22.8 for 1566 reflections in the resolution range 15.00 to 2.00 Ångstroms with I > 2. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1EG6

PubMed: 11106483




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