NDB ID: DD0027


Title:COMPLEX OF D(CCTAGG) WITH TETRA-[N-METHYL-PYRIDYL] PORPHYRIN
Molecular Description:5'-D((CBR)pCpTpApGpG)-3'
TETRA[N-METHYL-PYRIDYL] PORPHYRIN-NICKEL
Nucleic Acid Sequence:
ChainsA,B,C,D:(CBR) (DC) (DT) (DA) (DG) (DG)
Primary Citation:Bennett, M., Krah, A., Wien, F., Garman, E., McKenna, R., Sanderson, M., Neidle, S.
A DNA-porphyrin minor-groove complex at atomic resolution: the structural consequences of porphyrin ruffling.
Proc.Natl.Acad.Sci.USA , 97, pp. 9476 - 9481, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 41
Cell Constants:
a = 32.210b = 32.210c = 62.257(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 15.2 for 37075 reflections in the resolution range 6. to 0.9 Ångstroms with I > 2. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1EM0

PubMed: 10920199




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