NDB ID: DD0029


Title:BINDING OF A MACROCYCLIC BISACRIDINE AND AMETANTRONE TO CGTACG INVOLVES SIMILAR UNUSUAL INTERCALATION PLATFORMS (AMETANTRONE COMPLEX)
Molecular Description:DNA (5'-D(CpGpTpApCp
G)-3') - ANTHRACENE-9-10-DIOL COMPLEX
Structural Features:B DOUBLE HELIX, flipped-out bases, stacked anthracene molecule
Nucleic Acid Sequence:
ChainsA,B:(DC) (DG) (DT) (DA) (DC) (DG)
Primary Citation:Yang, X.L., Robinson, H., Gao, Y.G., Wang, A.H.
Binding of a macrocyclic bisacridine and ametantrone to CGTACG involves similar unusual intercalation platforms.
Biochemistry , 39, pp. 10950 - 10957, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 2
Cell Constants:
a = 29.094b = 52.714c = 40.183(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 24.9 for 3272 reflections in the resolution range 20. to 1.6 Ångstroms with I > 2. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1FDG

PubMed: 10998231




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