NDB ID: DD0055


Title:STRUCTURE OF THE FIRST PARALLEL DNA QUADRUPLEX-DRUG COMPLEX
Molecular Description:5'-D(TpGpGpGpGpT)-3'
Structural Features:B QUADRUPLE HELIX, PARALLEL-STRANDED TETRAPLEX
Nucleic Acid Sequence:
ChainsA, B, C, D: (DT) (DG) (DG) (DG) (DG) (DT)
Primary Citation:Clark, G.R., Pytel, P.D., Squire, C.J., Neidle, S.
Structure of the First Parallel DNA Quadruplex-drug Complex
J.Am.Chem.Soc. , 125, pp. 4066 - 4067, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 53.004b = 47.073c = 31.865(Ångstroms)
= 90.00 = 119.80 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:NaCl, Cacodylate buffer, Calcium Chloride, Spermine, MPD
Reservoir:NaCl, Calcium Chloride, MPD
Refinement:The structure was refined using the SHELXL-97 program. The R value is 15.7 for 18761 reflections in the resolution range 10.0 to 1.17 Ångstroms with Fobs > 4.0 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Links

The Protein Data Bank: 1O0K

PubMed: 12670225




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