NDB ID: DD0059


Title:B-DNA DODECAMER CGTGAATTCACG COMPLEXED WITH MINOR GROOVE BINDER METHYLPROAMINE
Molecular Description:5'-D(CpGpCpGpApApTpTpCpGpCpG)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DC) (DG) (DC) (DG) (DA) (DA) (DT) (DT) (DC) (DG) (DC) (DG)
Primary Citation:Martin, R.F., Broadhurst, S., Reum, M.E., Squire, C.J., Clark, G.R., Lobachevsky, P.N., White, J.M., Clark, C., Sy, D., Spotheim-Maurizot, M., Kelly, D.P.
In vitro studies with methylproamine: a potent new radioprotector.
Cancer Res. , 64, pp. 1067 - 1070, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 25.440b = 40.640c = 66.350(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS program. The R value is 22.8 for 2320 reflections in the resolution range 8.0 to 2.5 Ångstroms with I > 0.0 sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1QV4

PubMed: 14871839




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