NDB ID: DD0067


Title:ECHINOMYCIN (ACGTACGT)2 COMPLEX
Molecular Description:5'-D(ApCpGpTpApCpGpT)-3'
echinomycin
Structural Features:B DOUBLE HELIX, OPEN HELIX, BASE INTERCALATED
Nucleic Acid Sequence:
ChainA:(DA) (DC) (DG) (DT) (DA) (DC) (DG) (DT)
Primary Citation:Cuesta-Seijo, J.A., Sheldrick, G.M.
Structures of complexes between echinomycin and duplex DNA.
Acta Crystallogr.,Sect.D , 61, pp. 442 - 448, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 63   2
Cell Constants:
a = 39.928b = 39.928c = 80.098(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 19.8 for 6499 reflections in the resolution range 26.2 to 1.50 Ångstroms with I > 0. sigma(I).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1XVN

PubMed: 15805599




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