NDB ID: DD0092


Title:STRUCTURAL ADAPTATION AND CONSERVATION IN QUADRUPLEX-DRUG RECOGNITION
Molecular Description:5'-D(DTDApDGpDGpDGpDTpDTpDApDGpDGpDGpDTp
DTpDApDGpDGpDGpDTpDTpDApDGpDGpDG)-3'
Structural Features:QUADRUPLE HELIX, LOOP
Nucleic Acid Sequence:
ChainsA,B:(DT) (DA) (DG) (DG) (DG) (DT) (DT) (DA) (DG) (DG) (DG) (DT) (DT) (DA) (DG) (DG) (DG) (DT) (DT) (DA) (DG) (DG) (DG)
Primary Citation:Parkinson, G.N., Cuenca, F., Neidle, S.
Topology conservation and loop flexibility in quadruplex-drug recognition: crystal structures of inter- and intramolecular telomeric DNA quadruplex-drug complexes
J.Mol.Biol. , 381, pp. 1145 - 1156, 2008.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 39.575b = 43.084c = 56.937(Ångstroms)
= 90.00 = 103.58 = 90.00(degrees)
Refinement:The structure was refined using the REFMAC 5.1.19 program. The R value is 23.4 for 9497 reflections in the resolution range 10.00 to 2.10 Ångstroms with Fobs > 0. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 3CDM

PubMed: 18619463




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