NDB ID: DDF056
Title:
CRYSTAL STRUCTURE OF FOUR MORPHOLINO-DOXORUBICIN ANTICANCER DRUGS COMPLEXED WITH D(CGTACG) AND D(CGATCG): IMPLICATIONS IN DRUG-DNA CROSSLINK
Molecular Description:
5'-D(CpGpApTpCpG)-3'
3'-DESAMINO-3'-(3-CYANO-4-MORPHOLINYL)-DOXORUBICIN
Structural Features:
RH DOUBLE HELIX
Nucleic Acid Sequence:
Chain
A:
(DC) (DG) (DA) (DT) (DC) (DG)
Primary Citation:
Gao, Y.G., Wang, A.H.
Crystal structures of four morpholino-doxorubicin anticancer drugs complexed with d(CGTACG) and d(CGATCG): implications in drug-DNA crosslink.
J.Biomol.Struct.Dyn.
,
13
, pp. 103 - 117, 1995.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P
4
1
2
1
2
Cell Constants:
a = 28.186
b = 28.186
c = 53.352
(Ångstroms)
= 90.00
= 90.00
= 90.00
(degrees)
Refinement:
The structure was refined using the NUCLSQ program. The R value is 21.9 for 1652 reflections in the resolution of 1.800 with Fobs > 2.000 sigma(Fobs).
Biological Unit 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Unit 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Unit coordinates (pdb format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The Protein Data Bank:
236D
PubMed:
8527023
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©1995-2009 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey