NDB ID: DDF060


Title:STRUCTURE OF A DNA-PORPHYRIN COMPLEX
Molecular Description:5'-D(CpGpApTpCpG)-3'

CU(II)MESO-(4-N-TETRAMETHYLPYRIDYL)PORPHYRIN
Structural Features:RH DOUBLE HELIX, FLIPPED-OUT BASE
Nucleic Acid Sequence:
ChainA:(DC) (DG) (DA) (DT) (DC) (DG)
Primary Citation:Lipscomb, L.A., Zhou, F.X., Presnell, S.R., Woo, R.J., Peek, M.E., Plaskon, R.R., Williams, L.D.
Structure of DNA-porphyrin complex.
Biochemistry , 35, pp. 2818 - 2823, 1996.
Experimental Information:X-RAY DIFFRACTION
Space Group: 61   2
Cell Constants:
a = 39.490b = 39.490c = 56.150(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 21.9 for 937 reflections in the resolution range 8.000 to 2.400 Ångstroms with Fobs > 1.500 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 231D

PubMed: 8608116




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