NDB ID: DDF068


Title:SUBSTITUTIONS AT C2' OF DAUNOSAMINE IN THE ANTICANCER DAUNORUBICIN ALTER ITS DNA-BINDING SEQUENCE SPECIFICITY
Molecular Description:5'-D(CpGp(G49)pCpCpG)-3'
2'-BROMO-4'-EPIDAUNORUBICIN
Structural Features:RH DOUBLE HELIX
Nucleic Acid Sequence:
ChainA:(DC) (DG) (G49) (DC) (DC) (DG)
Primary Citation:Gao, Y.G., Priebe, W., Wang, A.H.
Substitutions at C2' of daunosamine in the anticancer drug daunorubicin alter its DNA-binding sequence specificity.
Eur.J.Biochem. , 240, pp. 331 - 335, 1996.
Experimental Information:X-RAY DIFFRACTION
Space Group: 41   21   2
Cell Constants:
a = 28.250b = 28.250c = 53.670(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the NUCLSQ program. The R value is 18.3 for 1860 reflections in the resolution range 10.000 to 1.800 Ångstroms with Fobs > 4.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 278D

PubMed: 8841395




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