NDB ID: DDFA14


Title:BINDING OF THE ANTITUMOR DRUG NOGALAMYCIN AND ITS DERIVATIVES TO DNA: STRUCTURAL COMPARISON
Molecular Description:5'-D((5CM)pGpTp(AS)p(5CM)pG)-3'
NOGALAMYCIN
Structural Features:RH DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(5CM) (DG) (DT) (AS) (5CM) (DG)
Primary Citation:Gao, Y.G., Liaw, Y.C., Robinson, H., Wang, A.H.
Binding of the antitumor drug nogalamycin and its derivatives to DNA: structural comparison.
Biochemistry , 29, pp. 10307 - 10316, 1990.
Experimental Information:X-RAY DIFFRACTION
Space Group: 61
Cell Constants:
a = 26.310b = 26.310c = 100.250(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the NUCLSQ program. The R value is 20.8 for 3386 reflections in the resolution of 1.700 with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1D21

PubMed: 2261474




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