NDB ID: DDFB70


Title:BINDING OF DAUNOMYCIN TO B-D-GLUCOSYLATED DNA FOUND IN PROTOZOA TRYPANOSOMA BRUCEI STUDIED BY X-RAY CRYSTALLOGRAPH
Molecular Description:5'-D(CpGpTpApCpG)-3'
DAUNOMYCIN
Structural Features:RH DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DC) (DG) (DT) (DA) (DC) (DG)
Primary Citation:Gao, Y.-G., Robinson, H., Wijsman, E.R., Van Der Marel, G.A., Van Boom, J.H., Wang, A.H.-J.
Binding of Daunomycin to beta-D-Glucosylated DNA Found in Protozoa Trypanosoma brucei Studied by X-Ray Crystallography
J.Am.Chem.Soc. , 119, pp. 1496 - 1497, 1997.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 18.619b = 20.096c = 26.553(Ångstroms)
= 69.09 = 90.40 = 108.03(degrees)
Refinement:The structure was refined using the X-PLOR 3.1 program. The R value is 17.5 for 4678 reflections in the resolution range 10.000 to 1.500 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 308D




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