NDB ID: DDFP21


Title:STRUCTURE OF 11-DEOXYDAUNOMYCIN BOUND TO DNA CONTAINING A PHOSPHOROTHIOATE
Molecular Description:5'-D(CpGpTp(AS)pCpG)-3'
11-DEOXYDAUNOMYCIN
Structural Features:RH DOUBLE HELIX
Nucleic Acid Sequence:
ChainA:(DC) (DG) (DT) (AS) (DC) (DG)
Primary Citation:Williams, L.D., Egli, M., Ughetto, G., van der Marel, G.A., van Boom, J.H., Quigley, G.J., Wang, A.H., Rich, A., Frederick, C.A.
Structure of 11-deoxydaunomycin bound to DNA containing a phosphorothioate.
J.Mol.Biol. , 215, pp. 313 - 320, 1990.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 17.730b = 19.130c = 26.360(Ångstroms)
= 90.00 = 98.01 = 90.00(degrees)
Refinement:The structure was refined using the NUCLSQ program. The R value is 22.4 for 2129 reflections in the resolution of 1.500 with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1D14

PubMed: 2152325




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