NDB ID: DDJ075


Title:CRYSTAL STRUCTURE OF A DOUBLE-STRANDED DNA DECAMER CONTAINING A CISPLATIN INTERSTRAND CROSS-LINK ADDUCT
Molecular Description:5'-D(CpCpTpCpGpCpTpCpTpC)-3'
5'-D(GpApGpApGpCpGpApGpG)-3'
CIS-PLATINUM
Structural Features:RH DOUBLE HELIX, FLIPPED-OUT BASES, INTERSTRAND CROSS-LINK
Nucleic Acid Sequence:
ChainA:(DC) (DC) (DT) (DC) (DG) (DC) (DT) (DC) (DT) (DC)
ChainB:(DG) (DA) (DG) (DA) (DG) (DC) (DG) (DA) (DG) (DG)
Primary Citation:Coste, F., Malinge, J.M., Serre, L., Shepard, W., Roth, M., Leng, M., Zelwer, C.
Crystal structure of a double-stranded DNA containing a cisplatin interstrand cross-link at 1.63 A resolution: hydration at the platinated site.
Nucleic Acids Res. , 27, pp. 1837 - 1846, 1999.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 42.890b = 29.980c = 46.570(Ångstroms)
= 90.00 = 95.98 = 90.00(degrees)
Refinement:The structure was refined using the SHELXL-96 program. The R value is 16.9 for 6983 reflections in the resolution range 20.0 to 1.63 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1A2E

PubMed: 10101191




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