NDB ID: DR0006


Title:COMPLEX BETWEEN PAROMOMYCIN AND THE 16S-RRNA A-SITE AT 2.5 A RESOLUTION
Molecular Description:16S-rRNA A-SITE
PAROMOMYCIN
Structural Features:A DOUBLE HELIX, BULGES
Nucleic Acid Sequence:
ChainsA, B: C G C G U C A C A C C G G U G A A G U C G C
Primary Citation:Vicens, Q., Westhof, E.
Crystal structure of paromomycin docked into the eubacterial ribosomal decoding A site.
Structure , 9, pp. 647 - 658, 2001.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 33.000b = 45.900c = 95.300(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:MPD, NaCl, MgSO4, glycerol, sodium cacodylate
Reservoir:MPD
Refinement:The structure was refined using the CNS 1.0 program. The R value is 20.6 for 4772 reflections in the resolution range 15 to 2.5 Ångstroms with Fobs > 1.5 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1J7T

PubMed: 11587639




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