NDB ID: DR0008


Title:CRYSTAL STRUCTURE OF GENETICIN BOUND TO THE EUBACTERIAL 16S RRNA A SITE
Molecular Description:5'-R(CpGpCpGpUpCpApCpApCpCpGpGpUpGpApAp
GpUpCpGpC)-3'
geneticin
Structural Features:A DOUBLE HELIX, BULGES
Nucleic Acid Sequence:
ChainsA,B:C G C G U C A C A C C G G U G A A G U C G C
Primary Citation:Vicens, Q., Westhof, E.
Crystal structure of geneticin bound to a bacterial 16S ribosomal RNA A site oligonucleotide
J.Mol.Biol. , 326, pp. 1175 - 1188, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 46.200b = 33.180c = 51.740(Ångstroms)
= 90.00 = 104.13 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.1 program. The R value is 22.4 for 5334 reflections in the resolution range 22.61 to 2.40 Ångstroms with Fobs > 1.5 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1MWL

PubMed: 12589761

FR3D annotation of basepairs, stacking, motifs, and other interactions for: 1MWL




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