NDB ID: DR0012


Title:THE COMPLEX OF A NOVEL ANTIBIOTIC WITH THE AMINOACYL SITE OF THE BACTERIAL RIBOSOME REVEALED BY X-RAY CRYSTALLOGRAPHY.
Molecular Description:5'-R(CGpCpGpUpCpApCpApCpCpGpGpUpGpApApGp
UpCpGpC)-3'
PAROMOMYCIN (RING 2)
4-AMINO-2-HYDROXYBUTANOIC ACID
Nucleic Acid Sequence:
ChainsA, B: C G C G U C A C A C C G G U G A A G U C G C
Primary Citation:Russell, R.J., Murray, J.B., Lentzen, G., Haddad, J., Mobashery, S.
The complex of a designer antibiotic with a model aminoacyl site of the 30S ribosomal subunit revealed by X-ray crystallography.
J.Am.Chem.Soc. , 125, pp. 3410 - 3411, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 32.800b = 46.550c = 88.810(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS program. The R value is 25.07 for 5247 reflections in the resolution range 30.0 to 2.4 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1O9M

PubMed: 12643685




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