<?xml version="1.0"?>
<!DOCTYPE rnaml SYSTEM "rnaml.dtd">

<rnaml version="1.0">

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      <sequence>
         <numbering-system id="1" used-in-file="false">
            <numbering-range>
               <start>1</start>
               <end>15</end>
            </numbering-range>
         </numbering-system>
         <numbering-table length="15" comment="sequence number in pdb file">
            2    3    4    5    6    7    8    9   10   11 
           12   13   14   15   16 
         </numbering-table>
         <seq-data>
            GUGGUGAAGU CGCGG
         </seq-data>
      </sequence>
      <structure>
         <model id="?">
            <model-info>
               <method>Crystallography ?</method>
               <resolution>? Angstroms</resolution>
            </model-info>
            <base>
               <position>1</position>
               <base-type>G</base-type>
               <atom serial="6">
                  <atom-type> O3'</atom-type>
                     <coordinates>53.977 20.367 0.445</coordinates>
               </atom>
            </base>
            <base>
               <position>2</position>
               <base-type>U</base-type>
               <atom serial="21">
                  <atom-type> P  </atom-type>
                     <coordinates>54.498 19.794 1.857</coordinates>
               </atom>
               <atom serial="29">
                  <atom-type> O3'</atom-type>
                     <coordinates>53.983 21.271 7.267</coordinates>
               </atom>
            </base>
            <base>
               <position>3</position>
               <base-type>G</base-type>
               <atom serial="41">
                  <atom-type> P  </atom-type>
                     <coordinates>54.346 20.002 8.160</coordinates>
               </atom>
               <atom serial="49">
                  <atom-type> O3'</atom-type>
                     <coordinates>51.402 18.594 12.842</coordinates>
               </atom>
            </base>
            <base>
               <position>4</position>
               <base-type>G</base-type>
               <atom serial="64">
                  <atom-type> P  </atom-type>
                     <coordinates>52.564 17.515 13.077</coordinates>
               </atom>
               <atom serial="72">
                  <atom-type> O3'</atom-type>
                     <coordinates>49.143 14.034 15.899</coordinates>
               </atom>
            </base>
            <base>
               <position>5</position>
               <base-type>U</base-type>
               <atom serial="87">
                  <atom-type> P  </atom-type>
                     <coordinates>50.036 12.725 16.098</coordinates>
               </atom>
               <atom serial="95">
                  <atom-type> O3'</atom-type>
                     <coordinates>47.262 8.167 16.130</coordinates>
               </atom>
            </base>
            <base>
               <position>6</position>
               <base-type>G</base-type>
               <atom serial="107">
                  <atom-type> P  </atom-type>
                     <coordinates>48.304 6.953 16.093</coordinates>
               </atom>
               <atom serial="115">
                  <atom-type> O3'</atom-type>
                     <coordinates>46.782 2.446 13.888</coordinates>
               </atom>
            </base>
            <base>
               <position>7</position>
               <base-type>A</base-type>
               <atom serial="130">
                  <atom-type> P  </atom-type>
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               </atom>
               <atom serial="138">
                  <atom-type> O3'</atom-type>
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               <position>8</position>
               <base-type>A</base-type>
               <atom serial="152">
                  <atom-type> P  </atom-type>
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               <atom serial="160">
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                     <coordinates>52.688 -4.584 6.330</coordinates>
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            <base>
               <position>9</position>
               <base-type>G</base-type>
               <atom serial="174">
                  <atom-type> P  </atom-type>
                     <coordinates>52.863 -3.172 5.580</coordinates>
               </atom>
               <atom serial="182">
                  <atom-type> O3'</atom-type>
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            </base>
            <base>
               <position>10</position>
               <base-type>U</base-type>
               <atom serial="197">
                  <atom-type> P  </atom-type>
                     <coordinates>56.959 -3.446 1.482</coordinates>
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               <atom serial="205">
                  <atom-type> O3'</atom-type>
                     <coordinates>60.049 -1.477 -2.102</coordinates>
               </atom>
            </base>
            <base>
               <position>11</position>
               <base-type>C</base-type>
               <atom serial="217">
                  <atom-type> P  </atom-type>
                     <coordinates>61.412 -2.172 -1.607</coordinates>
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               <atom serial="225">
                  <atom-type> O3'</atom-type>
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               <base-type>G</base-type>
               <atom serial="237">
                  <atom-type> P  </atom-type>
                     <coordinates>67.093 0.678 -1.796</coordinates>
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               <atom serial="245">
                  <atom-type> O3'</atom-type>
                     <coordinates>70.831 4.176 0.802</coordinates>
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            <base>
               <position>13</position>
               <base-type>C</base-type>
               <atom serial="260">
                  <atom-type> P  </atom-type>
                     <coordinates>72.044 3.401 1.511</coordinates>
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               <atom serial="268">
                  <atom-type> O3'</atom-type>
                     <coordinates>74.521 4.489 4.562</coordinates>
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            <base>
               <position>14</position>
               <base-type>G</base-type>
               <atom serial="280">
                  <atom-type> P  </atom-type>
                     <coordinates>75.386 3.265 5.163</coordinates>
               </atom>
               <atom serial="288">
                  <atom-type> O3'</atom-type>
                     <coordinates>76.142 1.542 10.573</coordinates>
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            </base>
            <base>
               <position>15</position>
               <base-type>G</base-type>
               <atom serial="303">
                  <atom-type> P  </atom-type>
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               <atom serial="311">
                  <atom-type> O3'</atom-type>
                     <coordinates>75.768 -2.466 15.010</coordinates>
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            </base>
            <str-annotation>
               <single-strand>
                  <segment>
                     <seg-name>SG1</seg-name>
                     <base-id-5p><base-id><position>7</position></base-id></base-id-5p>
                     <base-id-3p><base-id><position>10</position></base-id></base-id-3p>
                  </segment>
               </single-strand>
               <single-strand>
                  <segment>
                     <seg-name>SG2</seg-name>
                     <base-id-5p><base-id><position>15</position></base-id></base-id-5p>
                     <base-id-3p><base-id><position>15</position></base-id></base-id-3p>
                  </segment>
               </single-strand>
            </str-annotation>
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                  <base-id><position>1</position></base-id>
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               <ss-base-coord>
                  <base-id><position>2</position></base-id>
                  <coordinates>0.000 51.163</coordinates>
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               <ss-base-coord>
                  <base-id><position>3</position></base-id>
                  <coordinates>0.000 83.140</coordinates>
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               <ss-base-coord>
                  <base-id><position>4</position></base-id>
                  <coordinates>0.000 115.116</coordinates>
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               <ss-base-coord>
                  <base-id><position>5</position></base-id>
                  <coordinates>0.000 147.093</coordinates>
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               <ss-base-coord>
                  <base-id><position>6</position></base-id>
                  <coordinates>0.000 179.070</coordinates>
               </ss-base-coord>
               <ss-base-coord>
                  <base-id><position>7</position></base-id>
                  <coordinates>0.000 211.047</coordinates>
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               <ss-base-coord>
                  <base-id><position>8</position></base-id>
                  <coordinates>0.000 275.000</coordinates>
               </ss-base-coord>
               <ss-base-coord>
                  <base-id><position>9</position></base-id>
                  <coordinates>0.000 338.953</coordinates>
               </ss-base-coord>
               <ss-base-coord>
                  <base-id><position>10</position></base-id>
                  <coordinates>0.000 402.907</coordinates>
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               <ss-base-coord>
                  <base-id><position>11</position></base-id>
                  <coordinates>0.000 434.884</coordinates>
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               <ss-base-coord>
                  <base-id><position>12</position></base-id>
                  <coordinates>0.000 466.860</coordinates>
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               <ss-base-coord>
                  <base-id><position>13</position></base-id>
                  <coordinates>0.000 498.837</coordinates>
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               <ss-base-coord>
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                  <coordinates>0.000 530.814</coordinates>
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               <ss-base-coord>
                  <base-id><position>15</position></base-id>
                  <coordinates>0.000 550.000</coordinates>
               </ss-base-coord>
            </secondary-structure-display>
         </model>
      </structure>
   </molecule>

   <molecule id="2">
      <sequence>
         <numbering-system id="2" used-in-file="false">
            <numbering-range>
               <start>1</start>
               <end>14</end>
            </numbering-range>
         </numbering-system>
         <numbering-table length="14" comment="sequence number in pdb file">
           21   22   23   24   25 
           26   27   28   29   30   31   32   33   34 
         </numbering-table>
         <seq-data>
            CGCGU CACACCACC
         </seq-data>
      </sequence>
      <structure>
         <model id="?">
            <model-info>
               <method>Crystallography ?</method>
               <resolution>? Angstroms</resolution>
            </model-info>
            <base>
               <position>1</position>
               <base-type>C</base-type>
               <atom serial="331">
                  <atom-type> O3'</atom-type>
                     <coordinates>62.944 -1.420 17.098</coordinates>
               </atom>
            </base>
            <base>
               <position>2</position>
               <base-type>G</base-type>
               <atom serial="343">
                  <atom-type> P  </atom-type>
                     <coordinates>62.204 -0.103 16.563</coordinates>
               </atom>
               <atom serial="351">
                  <atom-type> O3'</atom-type>
                     <coordinates>64.265 4.601 17.000</coordinates>
               </atom>
            </base>
            <base>
               <position>3</position>
               <base-type>C</base-type>
               <atom serial="366">
                  <atom-type> P  </atom-type>
                     <coordinates>63.425 5.760 16.247</coordinates>
               </atom>
               <atom serial="374">
                  <atom-type> O3'</atom-type>
                     <coordinates>64.822 9.677 13.474</coordinates>
               </atom>
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            <base>
               <position>4</position>
               <base-type>G</base-type>
               <atom serial="386">
                  <atom-type> P  </atom-type>
                     <coordinates>63.509 10.358 12.828</coordinates>
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               <atom serial="394">
                  <atom-type> O3'</atom-type>
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                  <atom-type> P  </atom-type>
                     <coordinates>61.541 12.549 7.747</coordinates>
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                  <atom-type> O3'</atom-type>
                     <coordinates>60.363 12.924 2.760</coordinates>
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               <position>6</position>
               <base-type>C</base-type>
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                  <atom-type> P  </atom-type>
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                  <atom-type> O3'</atom-type>
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                  <atom-type> P  </atom-type>
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                  <atom-type> P  </atom-type>
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                  <atom-type> P  </atom-type>
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               <base-type>C</base-type>
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               <single-strand>
                  <segment>
                     <seg-name>SG2</seg-name>
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   </molecule>


   <interactions>
            <str-annotation>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>1</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>13</position>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>2</position>
                     </base-id>
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                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>12</position>
                     </base-id>
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                  <edge-5p>-</edge-5p>
                  <edge-3p>-</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>3</position>
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                  <base-id-3p>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>4</position>
                     </base-id>
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                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>10</position>
                     </base-id>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>5</position>
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                  <base-id-3p>
                     <base-id>
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                  <edge-5p>-</edge-5p>
                  <edge-3p>-</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>6</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>8</position>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>9</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>11</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>4</position>
                     </base-id>
                  </base-id-3p>
                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>12</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>3</position>
                     </base-id>
                  </base-id-3p>
                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>13</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>2</position>
                     </base-id>
                  </base-id-3p>
                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>14</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>1</position>
                     </base-id>
                  </base-id-3p>
                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <helix id="H1">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>1</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>13</position>
                     </base-id>
                  </base-id-3p>
                  <length>6</length>
               </helix>
               <helix id="H2">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>11</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>4</position>
                     </base-id>
                  </base-id-3p>
                  <length>4</length>
               </helix>
            </str-annotation>
   </interactions>
</rnaml>
