NDB ID: GDJB58


Title:A NOVEL END-TO-END BINDING OF TWO NETROPSINS TO THE DNA DECAMER D(CCCCCIIIII)2
Molecular Description:5'-D(CpCpCp(CBR)pCpIpIpIpIpI)-3'
NETROPSIN
Structural Features:B DOUBLE HELIX, DOUBLE DRUG IN THE MINOR GROOVE
Nucleic Acid Sequence:
ChainsA,B,C,D:(DC) (DC) (DC) (CBR) (DC) (DI) (DI) (DI) (DI) (DI)
Primary Citation:Chen, X., Mitra, S.N., Rao, S.T., Sekar, K., Sundaralingam, M.
A novel end-to-end binding of two netropsins to the DNA decamers d(CCCCCIIIII)2, d(CCCBr5CCIIIII)2and d(CBr5CCCCIIIII)2.
Nucleic Acids Res. , 26, pp. 5464 - 5471, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 32.660b = 32.770c = 37.710(Ångstroms)
= 86.01 = 84.37 = 68.90(degrees)
Refinement:The structure was refined using the X-PLOR 3.1 program. The R value is 19.0 for 3883 reflections in the resolution range 8.000 to 2.400 Ångstroms with Fobs > 4.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Links

The RCSB Protein Data Bank: 474D

PubMed: 9826773




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