NDB ID: PD0006


Title:D34G MUTANT OF PVUII ENDONUCLEASE COMPLEXED WITH COGNATE DNA SHOWS THAT ASP34 IS DIRECTLY INVOLVED IN DNA RECOGNITION AND INDIRECTLY INVOLVED IN CATALYSIS
Molecular Description:
PROTEIN (PVUII ENDONUCLEASE) MUTANT (D34G)/DNA COMPLEX
Structural Features:B DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainsC, D: (DT) (DG) (DA) (DC) (DC) (DA) (DG) (DC) (DT) (DG) (DG) (DT) (DC)
Protein Sequence:
ChainsA, B: Click here for sequence.
Primary Citation:Horton, J.R., Nastri, H.G., Riggs, P.D., Cheng, X.
Asp34 of PvuII endonuclease is directly involved in DNA minor groove recognition and indirectly involved in catalysis.
J.Mol.Biol. , 284, pp. 1491 - 1504, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 95.800b = 86.300c = 48.500(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 20.5 for 50527 reflections in the resolution range 5.0 to 1.59 Ångstroms with Fobs > 0.0 sigma(Fobs).

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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 3PVI

PubMed: 9878366




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