NDB ID: PD0010


Title:ECORV ENDONUCLEASE COMPLEX WITH 5'-CGGGATATCCC DNA
Molecular Description:ECORV ENDONUCLEASE/DNA COMPLEX
Structural Features:B DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainsC, D: (DC) (DG) (DG) (DG) (DA) (DT) (DA) (DT) (DC) (DC) (DC)
Protein Sequence:
ChainsA, B: Click here for sequence.
Primary Citation:Horton, N.C., Perona, J.J.
Recognition of flanking DNA sequences by EcoRV endonuclease involves alternative patterns of water-mediated contacts.
J.Biol.Chem. , 273, pp. 21721 - 21729, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 49.400b = 50.200c = 64.100(Ångstroms)
= 96.00 = 109.00 = 108.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:IMIDAZOLE, NaCl, PEG 4000
Reservoir:PEG 4000
Refinement:The structure was refined using the X-PLOR program. The R value is 18.4 for 31018 reflections in the resolution range 6.0 to 2.0 Ångstroms with Fobs > 1.0 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1BGB

PubMed: 9705308




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