NDB ID: PD0020


Title:STRUCTURES OF SAP-1 BOUND TO DNA SEQUENCES FROM THE E74 AND C-FOS PROMOTERS PROVIDE INSIGHTS INTO HOW ETS PROTEINS DISCRIMINATE BETWEEN RELATED DNA TARGETS
Molecular Description:SAP-1 ETS DOMAIN/DNA COMPLEX
Structural Features:B DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainA: (DT) (DA) (DC) (DC) (DG) (DG) (DA) (DA) (DG) (DT)
ChainB: (DA) (DA) (DC) (DT) (DT) (DC) (DC) (DG) (DG) (DT)
Protein Sequence:
ChainC: Click here for sequence.
Primary Citation:Mo, Y., Vaessen, B., Johnston, K., Marmorstein, R.
Structures of SAP-1 bound to DNA targets from the E74 and c-fos promoters: insights into DNA sequence discrimination by Ets proteins.
Mol.Cell , 2, pp. 201 - 212, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 31.590b = 55.670c = 44.230(Ångstroms)
= 90.00 = 107.16 = 90.00(degrees)
Crystallization Conditions:
Drop:SODIUM CACODYLATE, PEG 8000 ZINC ACETATE
Reservoir:PEG 8000
Refinement:The structure was refined using the X-PLOR 3.851 program. The R value is 22 for 10700 reflections in the resolution range 28.9 to 1.93 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
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Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1BC8

PubMed: 9734357




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