NDB ID: PD0024


Title:EBNA-1 NUCLEAR PROTEIN/DNA COMPLEX
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsC, D: (DG) (DG) (DG) (DA) (DA) (DG) (DC) (DA) (DT) (DA) (DT) (DG) (DC) (DT) (DT) (DC) (DC) (DC)
Protein Sequence:
ChainsA, B: Click here for sequence.
Primary Citation:Bochkarev, A., Bochkareva, E., Frappier, L., Edwards, A.M.
The 2.2 A structure of a permanganate-sensitive DNA site bound by the Epstein-Barr virus origin binding protein, EBNA1.
J.Mol.Biol. , 284, pp. 1273 - 1278, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 60.083b = 64.501c = 111.938(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:vapor diffusion - hanging drop
Drop:HEPES, NaCl, DTT, PEG 4000 MES, MgCl2
Reservoir:PEG 4000 MES, NaCl, MgCl2, DTT
Refinement:The structure was refined using the X-PLOR 3.843 program. The R value is 20.8 for 21158 reflections in the resolution range 6.0 to 2.2 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Unit 1
Other Views
Asymmetric Unit
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1B3T

PubMed: 9878348




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