NDB ID: PD0030


Title:OPEN TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
Molecular Description:
LARGE FRAGMENT OF DNA POLYMERASE I/DNA COMPLEX
Structural Features:B DOUBLE HELIX, FLIPPED-OUT BASES
Nucleic Acid Sequence:
ChainB:Click here for sequence.
ChainD:Click here for sequence.
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Li, Y., Korolev, S., Waksman, G.
Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation.
EMBO J. , 17, pp. 7514 - 7525, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 31   1
Cell Constants:
a = 108.414b = 108.414c = 89.843(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the X-PLOR 3.851 program. The R value is 22.4 for 25698 reflections in the resolution range 30.0 to 2.3 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Unit 1
Other Views
Asymmetric Unit
Enlarge Biological Unit 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 2KTQ

PubMed: 9857206




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