NDB ID: PD0032


Title:CRYSTAL STRUCTURE OF AN ACTIVE TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
Molecular Description:
LARGE FRAGMENT OF DNA POLYMERASE I/DNA COMPLEX
Structural Features:B DOUBLE HELIX, FLIPPED-OUT BASES, OVERHANGING BASES
Nucleic Acid Sequence:
ChainB:Click here for sequence.
ChainC:Click here for sequence.
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Li, Y., Korolev, S., Waksman, G.
Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation.
EMBO J. , 17, pp. 7514 - 7525, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 31   1
Cell Constants:
a = 108.028b = 108.028c = 90.167(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the X-PLOR 3.851 program. The R value is 21.8 for 26228 reflections in the resolution range 30.0 to 2.3 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Unit 1
Other Views
Asymmetric Unit
Enlarge Biological Unit 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 3KTQ

PubMed: 9857206




ndbadmin@ndbserver.rutgers.edu
©1995-2007 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey