NDB ID: PD0051


Title:CRYSTAL STRUCTURE OF HMG1 DOMAIN A BOUND TO A CISPLATIN-MODIFIED DNA DUPLEX
Molecular Description:
HIGH MOBILITY GROUP PROTEIN HMG1/DNA COMPLEX
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainB:Click here for sequence.
ChainC:Click here for sequence.
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Ohndorf, U.M., Rould, M.A., He, Q., Pabo, C.O., Lippard, S.J.
Basis for recognition of cisplatin-modified DNA by high-mobility-group proteins.
Nature , 399, pp. 708 - 712, 1999.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 105.210b = 50.410c = 53.130(Ångstroms)
= 90.00 = 99.82 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:MAGNESIUM ACETATE, HEPES, PEG 3350 GLYCEROL, DTT
Refinement:The structure was refined using the X-PLOR 3.851 program. The R value is 23.8 for 17638 reflections in the resolution range 100 to 2.5 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Unit 1
Other Views
Asymmetric Unit
Enlarge Biological Unit 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1CKT

PubMed: 10385126




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