NDB ID: PD0092


Title:CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT
Molecular Description:POU DOMAIN
CLASS 2
TRANSCRIPTION FACTOR 1/POU DOMAIN
CLASS 2
ASSOCIATING FACTOR 1/DNA COMPLEX
Structural Features:B DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainsM,O:Click here for sequence.
ChainsN,P:Click here for sequence.
Protein Sequence:
ChainsA,B: Click here for sequence.
ChainsI,J: Click here for sequence.
Primary Citation:Chasman, D., Cepek, K., Sharp, P.A., Pabo, C.O.
Crystal structure of an OCA-B peptide bound to an Oct-1 POU domain/octamer DNA complex: specific recognition of a protein-DNA interface.
Genes Dev. , 13, pp. 2650 - 2657, 1999.
Experimental Information:X-RAY DIFFRACTION
Space Group: 41   21   2
Cell Constants:
a = 93.722b = 93.722c = 152.651(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR 3.851 program. The R value is 26.4 for 11708 reflections in the resolution range 30.0 to 3.20 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1CQT

PubMed: 10541551




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