NDB ID: PD0117
Title:
CRYSTAL STRUCTURE OF THE HUMAN 8-OXOGUANINE GLYCOSYLASE (HOGG1) BOUND TO A SUBSTRATE OLIGONUCLEOTIDE
Molecular Description:
8-OXOGUANINE DNA GLYCOSYLASE/DNA COMPLEX
Structural Features:
B DOUBLE HELIX, FLIPPED-OUT BASES
Nucleic Acid Sequence:
Chain
C:
Click here for sequence.
Chain
D:
Click here for sequence.
Protein Sequence:
Chain
A:
Click here for sequence.
Primary Citation:
Bruner, S.D., Norman, D.P., Verdine, G.L.
Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA.
Nature
,
403
, pp. 859 - 866, 2000.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P
6
5
2
2
Cell Constants:
a = 92.357
b = 92.357
c = 212.872
(Ångstroms)
= 90.00
= 90.00
= 120.00
(degrees)
Refinement:
The structure was refined using the CNS 0.9 program. The R value is 23.2 for 29194 reflections in the resolution range 25. to 2.10 Ångstroms with I > 1.0 sigma(I).
Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
1EBM
PubMed:
10706276
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