NDB ID: PD0170


Title:DIPHTHERIA TOX REPRESSOR (C102D MUTANT) COMPLEXED WITH NICKEL AND DTXR CONSENSUS BINDING SEQUENCE
Molecular Description:DIPHTHERIA TOXIN REPRESSOR/DNA COMPLEX
Structural Features:B DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainE:Click here for sequence.
ChainF:Click here for sequence.
Protein Sequence:
ChainsA,B,C,D: Click here for sequence.
Primary Citation:Chen, C.S., White, A., Love, J., Murphy, J.R., Ringe, D.
Methyl groups of thymine bases are important for nucleic acid recognition by DtxR.
Biochemistry , 39, pp. 10397 - 10407, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 41
Cell Constants:
a = 116.178b = 116.178c = 142.919(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 0.9 program. The R value is 24.5 for 36454 reflections in the resolution range 48.83 to 3.00 Ångstroms with I > 0. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1F5T

PubMed: 10956029




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