NDB ID: PD0198


Title:CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
Molecular Description:
CAAT/ENHANCER BINDING PROTEIN BETA/DNA COMPLEX
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainE:Click here for sequence.
ChainF:Click here for sequence.
Protein Sequence:
ChainsA,B: Click here for sequence.
ChainC: Click here for sequence.
ChainD: Click here for sequence.
Primary Citation:Tahirov, T.H., Inoue-Bungo, T., Morii, H., Fujikawa, A., Sasaki, M., Kimura, K., Shiina, M., Sato, K., Kumasaka, T., Yamamoto, M., Ishii, S., Ogata, K.
Structural analyses of DNA recognition by the AML1/Runx-1 Runt domain and its allosteric control by CBFbeta.
Cell(Cambridge,Mass.) , 104, pp. 755 - 767, 2001.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21
Cell Constants:
a = 121.108b = 163.600c = 109.326(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 0.9 program. The R value is 24.7 for 21111 reflections in the resolution range 19.95 to 3.00 Ångstroms with I > 0. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1IO4

PubMed: 11257229




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