NDB ID: PD0204


Title:CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP DIMERIC BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
Molecular Description:CCAAT/ENHANCER BINDING PROTEIN BETA
RUNT-RELATED TRANSCRIPTION FACTOR 1
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsG,I:Click here for sequence.
ChainsH,J:Click here for sequence.
Protein Sequence:
ChainsA,B,D,E: Click here for sequence.
ChainsC,F: Click here for sequence.
Primary Citation:Tahirov, T.H., Inoue-Bungo, T., Morii, H., Fujikawa, A., Sasaki, M., Kimura, K., Shiina, M., Sato, K., Kumasaka, T., Yamamoto, M., Ishii, S., Ogata, K.
Structural Analyses of DNA Recognition by the Aml1/Runx-1 Runt Domain and its Allosteric Control by Cbfbeta
Cell(Cambridge,Mass.) , 104, pp. 755, 2001.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   2
Cell Constants:
a = 102.165b = 109.273c = 127.405(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 0.9 program. The R value is 24.4 for 26157 reflections in the resolution range 30.0 to 3.00 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1HJB

PubMed: 11257229




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey