NDB ID: PD0268


Title:CRYSTAL STRUCTURE OF VDR DNA-BINDING DOMAIN BOUND TO MOUSE OSTEOPONTIN (SPP) RESPONSE ELEMENT
Molecular Description:VITAMIN D3 RECEPTOR/DNA Complex
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainC:Click here for sequence.
ChainD:Click here for sequence.
Protein Sequence:
ChainsA,B: Click here for sequence.
Primary Citation:Shaffer, P.L., Gewirth, D.T.
Structural basis of VDR-DNA interactions on direct repeat response elements.
EMBO J. , 21, pp. 2242 - 2252, 2002.
Experimental Information:X-RAY DIFFRACTION
Space Group: 43   21   2
Cell Constants:
a = 62.14b = 62.14c = 241.75(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 22.6 for 12490 reflections in the resolution range 50. to 2.70 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1KB2

PubMed: 11980721




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