NDB ID: PD0276


Title:ANTIBODY 64M-2 FAB COMPLEXED WITH DTT(6-4)TT
Molecular Description:
ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (LIGHT CHAIN)/ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (HEAVY CHAIN)/DNA Complex
Structural Features:SINGLE STRAND
Nucleic Acid Sequence:
ChainA: (DT) (64T) (DT) (DT)
Protein Sequence:
ChainH: Click here for sequence.
ChainL: Click here for sequence.
Primary Citation:Yokoyama, H., Mizutani, R., Satow, Y., Sato, K., Komatsu, Y., Ohtsuka, E., Nikaido, O.
Crystal structure of DNA (6-4) photoproduct dTT(6-4)TT in complex with the 64M-2 antibody Fab fragment implies increased antibody-binding affinity by the flanking nucleotides
To be Published
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 73.567b = 137.274c = 49.615(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:PEG 8000 NiCl2, Tris-HCl
Refinement:The structure was refined using the X-PLOR 3.843 program. The R value is 20.1 for 17221 reflections in the resolution range 10.0 to 2.40 Ångstroms with Fobs > 0 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

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Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

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Derivative Data

Nucleic Acid Backbone Torsions

Links

The Protein Data Bank: 1KEG




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