NDB ID: PD0298


Title:CRYSTAL STRUCTURE OF A BACTERIAL QUORUM-SENSING TRANSCRIPTION FACTOR COMPLEXED WITH PHEROMONE AND DNA
Molecular Description:
Transcriptional activator protein traR/DNA Complex
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsE,F,G,H:(DG) (DA) (DT) (DG) (DT) (DG) (DC) (DA) (DG) (DA) (DT) (DC) (DT) (DG) (DC) (DA) (DC) (DA) (DT) (DC)
Protein Sequence:
ChainsA,B,C,D: Click here for sequence.
Primary Citation:Zhang, R.G., Pappas, T., Brace, J.L., Miller, P.C., Oulmassov, T., Molyneaux, J.M., Anderson, J.C., Bashkin, J.K., Winans, S.C., Joachimiak, A.
Structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA.
Nature , 417, pp. 971 - 974, 2002.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 92.298b = 58.370c = 127.453(Ångstroms)
= 90.00 = 102.81 = 90.00(degrees)
Refinement:The structure was refined using the CNS 0.9 program. The R value is 24.6 for 139194 reflections in the resolution range 39.60 to 1.66 Ångstroms with I > 0.0 sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1L3L

PubMed: 12087407




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