NDB ID: PD0307


Title:CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO AN IFNB-KB
Molecular Description:
Nuclear factor NF-kappa-B p65 subunit/Nuclear factor NF-kappa-B p50 subunit/DNA Complex
Structural Features:B DOUBLE HELIX, OVERHANGING BASE
Nucleic Acid Sequence:
ChainsC,G:(DT) (DG) (DG) (DG) (DA) (DA) (DA) (DT) (DT) (DC) (DC) (DT)
ChainsD,H:(DA) (DA) (DG) (DG) (DA) (DA) (DT) (DT) (DT) (DC) (DC) (DC)
Protein Sequence:
ChainsA,E: Click here for sequence.
ChainsB,F: Click here for sequence.
Primary Citation:Berkowitz, B., Huang, D.B., Chen-Park, F.E., Sigler, P.B., Ghosh, G.
The X-ray crystal structure of the NF-kB p50/p65 heterodimer bound to the Interferon beta-kB site
J.Biol.Chem. , 277, pp. 24694 - 24700, 2002.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 137.525b = 138.015c = 89.320(Ångstroms)
= 90.00 = 97.25 = 90.00(degrees)
Refinement:The structure was refined using the CNS 0.9 program. The R value is 26.0 for 37688 reflections in the resolution range 20.0 to 2.75 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1LE5

PubMed: 11970948




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