NDB ID: PD0310


Title:THE KB DNA SEQUENCE FROM THE HLV-LTR FUNCTIONS AS AN ALLOSTERIC REGULATOR OF HIV TRANSCRIPTION
Molecular Description:
NUCLEAR FACTOR NF-KAPPA-B P65 SUBUNIT/NUCLEAR FACTOR NF-KAPPA-B P50 SUBUNIT/DNA Complex
Structural Features:B DOUBLE HELIX, OVERHANGING BASE
Nucleic Acid Sequence:
ChainC:Click here for sequence.
ChainD:Click here for sequence.
Protein Sequence:
ChainA: Click here for sequence.
ChainB: Click here for sequence.
Primary Citation:Chen-Park, F.E., Huang, D.B., Noro, B., Thanos, D., Ghosh, G.
The kB DNA sequence from the HIV Long Terminal Repeat functions as an allosteric regulator of HIV transcription
J.Biol.Chem. , 277, pp. 24701 - 24708, 2002.
Experimental Information:X-RAY DIFFRACTION
Space Group: 2
Cell Constants:
a = 137.131b = 179.697c = 97.068(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS program. The R value is 25.0 for 29985 reflections in the resolution range 20.0 to 2.7 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1LEI

PubMed: 11970949




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